PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0072s0082.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 223aa    MW: 25518.1 Da    PI: 9.5439
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0072s0082.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.89.8e-19122211198
                          EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                          f+k +++s+v+ + +l lp +f+++h  k  e+ ++tlede+g++   ++    ++ +  l++GW++F+ +++L +gD +vF+l++ ++f
  Kalax.0072s0082.1.p 122 FVKPMSRSHVTGRFWLGLPQRFCKAHLPK--EDEMITLEDEDGNESPSNY--LANRTG--LSGGWRGFALDHELVDGDALVFQLIRPTKF 205
                          89************************533..4569***************..555444..*************************97777 PP

                          ..EEEEE- CS
                   B3  91 elvvkvfr 98 
                            +v ++r
  Kalax.0072s0082.1.p 206 --MVYIVR 211
                          ..999887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019367.65E-25116213IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.2E-21118212IPR015300DNA-binding pseudobarrel domain
CDDcd100175.46E-28120211No hitNo description
PfamPF023621.7E-17122211IPR003340B3 DNA binding domain
PROSITE profilePS5086312.449122213IPR003340B3 DNA binding domain
SMARTSM010192.3E-25122213IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MVESATSNYE KLRRQRLKEN KKRMEELNLL NLSKSLYAAT PKPSPAKHRK PKSARKEVDL  60
FAVRRSRRTA GKPRPDYKEG MCLMLSRGDL LNCVYASHES RLSAVKRTEQ LESELGFEYP  120
CFVKPMSRSH VTGRFWLGLP QRFCKAHLPK EDEMITLEDE DGNESPSNYL ANRTGLSGGW  180
RGFALDHELV DGDALVFQLI RPTKFMVYIV RVNEHENGDE SN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11222RRQRLKENKKR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007042396.12e-89AP2/B3-like transcriptional factor family protein, putative
SwissprotQ1G3M37e-73Y3918_ARATH; B3 domain-containing protein At3g19184
TrEMBLA0A061E0U42e-89A0A061E0U4_THECC; AP2/B3-like transcriptional factor family protein, putative
TrEMBLF6HQC12e-89F6HQC1_VITVI; Putative uncharacterized protein
STRINGVIT_03s0063g00620.t016e-89(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-68B3 family protein